User Tools

Site Tools


post-assembly_analysis:banana_slug_genome_browser

This is an old revision of the document!


  • Banana Slug Genome Browser will have a UCSC genome browser, once we get to the point of having few enough contigs that building a browser makes sense.
  • Mirroring the UCSC Genome Browser shows procedures for setting up a UCSC Genome Browser site. Although we are not trying to set up a mirror site, this still contains valuable configuration information.
  • Minimal Browser Install instructions are on the ucsc genomewiki.
  • Source Code provides kent source zip.
  • kent/src/product/README* has documentation on configuring and using the UCSC Genome Browser.
  • Internally, the Browser staff uses makeGenome.pl to automate much of the initial build of a browser for a new assembly. The kent source contains that script and other scripts that it calls.
You could leave a comment if you were logged in.
post-assembly_analysis/banana_slug_genome_browser.1270002283.txt.gz · Last modified: 2010/03/30 19:24 by galt