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lecture_notes:06-03-2011

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====== Paper Presentation ====== Sam Vohr presented the paper "Exact and complete short read alignment to microbial genomes using GPU programming"((http://bioinformatics.oxfordjournals.org/content/early/2011/03/30/bioinformatics.btr151.abstract)) which describes [[bioinformatic_tools:saruman|SARUMAN]] a tools for aligning short reads to a reference using Needlemap-Wunsch alignment implemented using CUDA. Details can be found on the [[bioinformatic_tools:saruman|SARUMAN]] page. It was decided that Wednesday June 8 at 12:00pm would be the deadline to get all updates into the wiki for grading.

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lecture_notes/06-03-2011.1307551876.txt.gz · Last modified: 2011/06/08 16:51 by svohr