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Paper Presentation

Sam Vohr presented the paper “Exact and complete short read alignment to microbial genomes using GPU programming”1) which describes SARUMAN a tools for aligning short reads to a reference using Needlemap-Wunsch alignment implemented using CUDA. Details can be found on the SARUMAN page.

It was decided that Wednesday June 8 at 12:00pm would be the deadline to get all updates into the wiki for grading.

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lecture_notes/06-03-2011.txt · Last modified: 2015/08/20 02:46 by