lecture_notes:04-16-2010
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lecture_notes:04-16-2010 [2010/04/16 22:49] svasili created |
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| * Kevin ran the assembly tool on POG 454 data under /campusdata/BME235/assemblies/Pog. | * Kevin ran the assembly tool on POG 454 data under /campusdata/BME235/assemblies/Pog. | ||
| * The README file in the directory contains important information about the assembly. | * The README file in the directory contains important information about the assembly. | ||
| + | * Info about tools installed is listed in bioinformatic_tools [[https://banana-slug.soe.ucsc.edu/bioinformatic_tools:gs_de_novo_assembler | GS De Novo Assembler]]. Info about how to run the De novo as well as Mapping assembly tools is also included there. | ||
| + | * Currently tools are installed under /campusdata/BME235/bin/old_Newbler/. | ||
| + | * Tools with prefix "gs" are not supposed to be run directly. | ||
lecture_notes/04-16-2010.txt ยท Last modified: 2010/04/20 03:09 by karplus
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