archive:summer_2015
Differences
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archive:summer_2015 [2015/06/09 00:32] JaredC [Volunteers] |
archive:summer_2015 [2015/06/09 01:07] charles [Agenda Items] |
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| | Siddra H | sihussai@ucsc.edu | ABySS | Green | | | | Siddra H | sihussai@ucsc.edu | ABySS | Green | | | ||
| | Emilio F | efeal@ucsc.edu | ABySS | | | | | Emilio F | efeal@ucsc.edu | ABySS | | | | ||
| + | | Charles M | cmarkell@ucsc.edu | SOAP | Haussler | | | ||
| Line 23: | Line 24: | ||
| A list of unresolved tasks | A list of unresolved tasks | ||
| + | * distribute T-shirts | ||
| * Decide on a final assembly from working assemblers. | * Decide on a final assembly from working assemblers. | ||
| * RNA Assembly | * RNA Assembly | ||
| Line 31: | Line 33: | ||
| * Repeats | * Repeats | ||
| * Mitochondria assembly | * Mitochondria assembly | ||
| + | * Use of old data (2010 and 2011 classes) | ||
| + | * Potentially adapt Discovar contigs for SOAPdenovo scaffolding. | ||
| Line 38: | Line 42: | ||
| * Disovar assembly with all shotgun data, accomplished on Kolussus | * Disovar assembly with all shotgun data, accomplished on Kolussus | ||
| + | * SOAPdenovo assembly with all shotgun data and gap closed, accomplished on edser2 | ||
archive/summer_2015.txt · Last modified: 2015/07/18 20:32 by ceisenhart
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