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archive:review_articles [2010/04/11 22:30] jstjohn |
archive:review_articles [2010/04/12 22:42] cbrumbau Formatted according to RefNotes plugin |
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- | ===== Assemblers Review Articles ====== | + | ====== Review Articles ====== |
- | ===Assembly algorithms for next-generation sequencing data=== | + | ===== Assembler review articles ====== |
- | [[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WG1-4YJ6GD8-1&_user=10&_coverDate=03%2F06%2F2010&_rdoc=1&_fmt=high&_orig=search&_sort=d&_docanchor=&view=c&_searchStrId=1282691739&_rerunOrigin=google&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=32c08d11cc10fd1eefca0f8a8def738b|Assembly algorithms for next-generation sequencing data]] | + | |
- | Jason R. Miller, Sergey Koren and Granger Suttona | + | ** Assembly algorithms for next-generation sequencing data **[(cite:assem_alg>Jason R. Miller, Sergey Koren, Granger Sutton. Assembly algorithms for next-generation sequencing data. //Genomics//, In Press, Corrected Proof, Available online 6 March 2010. ISSN 0888-7543. doi:[[http://dx.doi.org/10.1016/j.ygeno.2010.03.001|10.1016/j.ygeno.2010.03.001]].)] |
- | + | ||
- | Covers these assemblers: SSAKE, SHARCGS, VCAKE, Newbler, Celera, Euler, Velvet, ABySS, AllPaths, and SOAPdenovo. | + | |
- | + | ||
- | Compares de Bruijn graph to overlap/layout/consensus. | + | |
- | + | ||
- | Jason R. Miller, Sergey Koren, Granger Sutton, Assembly algorithms for next-generation sequencing data, Genomics, | + | |
- | In Press, Corrected Proof, Available online 6 March 2010, ISSN 0888-7543, DOI: 10.1016/j.ygeno.2010.03.001. | + | |
- | (http://www.sciencedirect.com/science/article/B6WG1-4YJ6GD8-1/2/ae6c957910e4ea658cdebff4a0ce9793) | + | |
- | Keywords: Genome assembly algorithms; Next-generation sequencing | + | |
+ | Covers these assemblers: SSAKE, SHARCGS, VCAKE, Newbler, Celera, Euler, Velvet, ABySS, AllPaths, and SOAPdenovo. | ||
+ | Compares de Bruijn graph to overlap/layout/consensus. | ||
+ | |||
+ | ===== References ===== | ||
+ | <refnotes>notes-separator: none</refnotes> | ||
+ | ~~REFNOTES cite~~ |