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//Ariolimax Dolicophallus// is a relatively unstudied species. Here we aim to provide concise and accurate biological information about //Ariolimax Dolicophallus//. | //Ariolimax Dolicophallus// is a relatively unstudied species. Here we aim to provide concise and accurate biological information about //Ariolimax Dolicophallus//. | ||
- | [[About the slug | About the slug ]] | + | [[about_the_slug:about_the_slug| About the slug ]] |
===== Data ===== | ===== Data ===== | ||
- | Links to the raw [[Data overview | data]], as well as processed data are provided [[Data overview | here]]. The data includes mate-pair data, raw Illumina reads, and RNA-seq. | + | Links to the raw [[data_overview:data_overview| data]], as well as processed data are provided [[data_overview:data_overview| here]]. The data includes mate-pair data, raw Illumina reads, and RNA-seq. |
- | [[Data overview | Data]] | + | [[data_overview:data_overview| Data]] |
===== Assemblies ===== | ===== Assemblies ===== | ||
- | The [[Assemblies | assemblies ]] are available for annotation, merging and other bioinformatics uses. The assemblies include full nuclear assemblies as well as mitochondrion assemblies. | + | The [[assemblies:assemblies| assemblies ]] are available for annotation, merging and other bioinformatics uses. The assemblies include full nuclear assemblies as well as mitochondrion assemblies. |
- | [[Assemblies | Assemblies ]] | + | [[assemblies:assemblies| Assemblies ]] |
===== Post-assembly analysis ===== | ===== Post-assembly analysis ===== | ||
- | Our [[Post-assembly_analysis|analysis]] of the completed assemblies. Includes the [[post-assembly_analysis:banana_slug_genome_browser|UCSC track hub for the banana slug]], analysis of heterozygosity and any annotation results. | + | Our [[post-assembly_analysis:post-assembly_analysis|analysis]] of the completed assemblies. Includes the [[post-assembly_analysis:banana_slug_genome_browser|UCSC assembly hub for the banana slug]], analysis of heterozygosity, the [[post-assembly_analysis:2015:rna_scaffolding | RNA scaffolding efforts]] and any progress made on gene finding/annotation. |
- | [[Post-assembly_analysis | Post-assembly analysis ]] | + | [[post-assembly_analysis:post-assembly_analysis| Post-assembly analysis ]] |
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===== About the class ===== | ===== About the class ===== | ||
- | The project is supported at UCSC as the BME235 Banana Slug Genomics class. More information about the class can be found in the [[About the class | general information]] link. To see which students have worked on the project view the [[about_the_class:contributors| contributors ]] link. The budget for the project is publicly viewable using the [[about_the_class:budget| budget]] link. Old pages, pages that do not follow the style guide, and pages that cannot be assimilated into the main wiki are archived [[Archive | here]]. | + | The project is supported at UCSC as the BME235 Banana Slug Genomics class. More information about the class can be found in the [[about_the_class:about_the_class| general information]] link. To see which students have worked on the project view the [[contributors:contributors| contributors ]] link. The budget for the project is publicly viewable using the [[about_the_class:budget| budget]] link. Old pages, pages that do not follow the style guide, and pages that cannot be assimilated into the main wiki are archived [[archive:archive| here]]. |
- | [[About the class | About the class ]] | + | [[about_the_class:about_the_class| About the class ]] |
- | [[about_the_class:contributors| Contributors]] | + | [[contributors:contributors| Contributors]] |
[[about_the_class:budget| Budget]] | [[about_the_class:budget| Budget]] | ||
- | [[Archive | Archive]] | + | [[archive:archive| Archive]] |
Currently we **are not** accepting donations. Thanks to all our past donors! | Currently we **are not** accepting donations. Thanks to all our past donors! |