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start [2015/07/28 06:46] 65.19.138.34 ↷ Links adapted because of a move operation |
start [2015/10/07 03:14] (current) karplus [About the slug] fixed spelling and capitalization of species |
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This project is hosted at UCSC as a graduate class BME235. All information is publicly accessible and free to use, please cite the authors when possible and the wiki as a whole. Please contact [[https://www.soe.ucsc.edu/people/karplus | Kevin Karplus]] with general questions. For questions on specific assemblies please identify the team that created the assembly and email them directly. | This project is hosted at UCSC as a graduate class BME235. All information is publicly accessible and free to use, please cite the authors when possible and the wiki as a whole. Please contact [[https://www.soe.ucsc.edu/people/karplus | Kevin Karplus]] with general questions. For questions on specific assemblies please identify the team that created the assembly and email them directly. | ||
===== About the slug ===== | ===== About the slug ===== | ||
- | //Ariolimax Dolicophallus// is a relatively unstudied species. Here we aim to provide concise and accurate biological information about //Ariolimax Dolicophallus//. | + | //Ariolimax dolichophallus// is a relatively unstudied species. Here we aim to provide concise and accurate biological information about //Ariolimax dolichophallus//. |
- | [[about_the_slug:about_the_slug| About the slug ]] | + | [[about_the_slug:about_the_slug| About the slug ]] |
+ | |||
+ | [[Banana_Slug_Dissection | Banana Slug Dissection]] | ||
===== Data ===== | ===== Data ===== | ||
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===== Post-assembly analysis ===== | ===== Post-assembly analysis ===== | ||
- | Our [[post-assembly_analysis:post-assembly_analysis|analysis]] of the completed assemblies. Includes the [[post-assembly_analysis:banana_slug_genome_browser|UCSC track hub for the banana slug]], analysis of heterozygosity and any annotation results. | + | Our [[post-assembly_analysis:post-assembly_analysis|analysis]] of the completed assemblies. Includes the [[post-assembly_analysis:banana_slug_genome_browser|UCSC assembly hub for the banana slug]], analysis of heterozygosity, the [[post-assembly_analysis:2015:rna_scaffolding | RNA scaffolding efforts]] and any progress made on gene finding/annotation. |
[[post-assembly_analysis:post-assembly_analysis| Post-assembly analysis ]] | [[post-assembly_analysis:post-assembly_analysis| Post-assembly analysis ]] | ||
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===== About the class ===== | ===== About the class ===== | ||
- | The project is supported at UCSC as the BME235 Banana Slug Genomics class. More information about the class can be found in the [[about_the_class:about_the_class| general information]] link. To see which students have worked on the project view the [[about_the_class:contributors| contributors ]] link. The budget for the project is publicly viewable using the [[about_the_class:budget| budget]] link. Old pages, pages that do not follow the style guide, and pages that cannot be assimilated into the main wiki are archived [[Archive | here]]. | + | The project is supported at UCSC as the BME235 Banana Slug Genomics class. More information about the class can be found in the [[about_the_class:about_the_class| general information]] link. To see which students have worked on the project view the [[contributors:contributors| contributors ]] link. The budget for the project is publicly viewable using the [[about_the_class:budget| budget]] link. Old pages, pages that do not follow the style guide, and pages that cannot be assimilated into the main wiki are archived [[archive:archive| here]]. |
[[about_the_class:about_the_class| About the class ]] | [[about_the_class:about_the_class| About the class ]] | ||
- | [[about_the_class:contributors| Contributors]] | + | [[contributors:contributors| Contributors]] |
[[about_the_class:budget| Budget]] | [[about_the_class:budget| Budget]] | ||
- | [[Archive | Archive]] | + | [[archive:archive| Archive]] |
Currently we **are not** accepting donations. Thanks to all our past donors! | Currently we **are not** accepting donations. Thanks to all our past donors! |