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start [2015/07/15 19:09] ceisenhart Major changes under way, please let me finish before doing more |
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This project is hosted at UCSC as a graduate class BME235. All information is publicly accessible and free to use, please cite the authors when possible and the wiki as a whole. Please contact [[https://www.soe.ucsc.edu/people/karplus | Kevin Karplus]] with general questions. For questions on specific assemblies please identify the team that created the assembly and email them directly. | This project is hosted at UCSC as a graduate class BME235. All information is publicly accessible and free to use, please cite the authors when possible and the wiki as a whole. Please contact [[https://www.soe.ucsc.edu/people/karplus | Kevin Karplus]] with general questions. For questions on specific assemblies please identify the team that created the assembly and email them directly. | ||
===== About the slug ===== | ===== About the slug ===== | ||
+ | The Ariolimax Dolicophallus is a relatively unstudied species. Here we aim to provide concise and accurate biological information about the Ariolimax Dolicophallus. | ||
[[About the slug | Biological information about the slug ]] | [[About the slug | Biological information about the slug ]] | ||
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+ | ===== Data ===== | ||
+ | Links to the raw data, as well as processed data is provided [[Data overview | here]] | ||
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+ | [[Data overview | Access to the raw and processed data]] | ||
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===== Assemblies ===== | ===== Assemblies ===== | ||
+ | The assemblies are available for annotation, merging and other bioinformatics uses. | ||
[[Full_genome_assemblies | Full genome assemblies ]] | [[Full_genome_assemblies | Full genome assemblies ]] | ||
[[Mitochondrion_assemblies | Mitochondrion assemblies ]] | [[Mitochondrion_assemblies | Mitochondrion assemblies ]] | ||
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+ | ===== Post-assembly analysis ===== | ||
+ | Our analysis of the completed assemblies. Includes the [[Banana slug genome browser |UCSC track hub for the banana slug]], analysis of heterozygosity, annotation results, and [[Euchromatin and Heterochromatin | analysis of banana slug euchromatin and heterochromatin]]. | ||
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+ | [[Banana slug genome browser] | UCSC Genome Browser Banana slug track hub] | ||
+ | [[Euchromatin and Heterochromatin | Banana slug euchromatin and heterochromatin]] | ||
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- | ===== Data ===== | ||
- | [[Data overview | Access to the raw and processed data]] | ||
===== About the class ===== | ===== About the class ===== | ||
+ | The project is supported at UCSC as the BME235 Banana Slug Genomics class. More information about the class can be found in the [[About the class | general information]] link. To see which students have worked on the project view the [[Students | students ]] link. The budget for the project is publicly viewable using the [[Budget | budget]] link. Old pages, pages that do not follow the style guide, and pages that cannot be assimilated into the main wiki are archived [[Archive | here]]. | ||
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+ | [[About the class | General information ]] | ||
- | [[About the class | General information about the class and wiki ]] | + | [[Students | Students ]] |
- | [[Teams | Team pages ]] | + | [[Budget | Budget]] |
- | [[Budget | The budget for our project]] | + | [[Archive | Archive]] |
Currently we **are not** accepting donations. Thanks to all our current and previous donors! | Currently we **are not** accepting donations. Thanks to all our current and previous donors! |