Differences

This shows you the differences between two versions of the page.

--- start [2015/07/15 17:14]
ceisenhart Major changes under way, please let me finish before doing more
+++ start [2015/07/15 17:26]
ceisenhart
@@ Line 16: / Line 16: @@
 [[Mitochondrion_assemblies | Mitochondrion assemblies ]]
-[[mitochondrion_2015 | 2015 Mitochondrion assembly ]]
-===== Raw data =====
+===== Data =====
-Data overview page
+[[Data overview | Access to the raw and processed data]]
 ===== About the class =====
@@ Line 60: / Line 59: @@
 [[mitochondrion_2015 | 2015 Mitochondrion assembly ]]
-Each team is attempting to assemble the banana slug genome with a different assembly program.  The results are posted in the team pages below. The assemblies are in the /campusdata/BME235/S15_assemblies/ folder on the campusrocks server.
+Each team is attempting to assemble the banana slug genome with a different assembly program.  The results are posted in the team pages below.
-| Team page | Contig N50 | Scaffold N50 | Total bases | Path |
-|[[team_1_page| Meraculous: Team 1 page]]| N/A | N/A | N/A | N/A |
-|[[soapdenovo2|SOAP: Team 2 page]]| 8,033 | 11,000 | 2,293,889,058 (non gap approx) | SOAPdenovo2/assemblyTask/SOAPdenovo2_run3_all/soapdenovo2_allAssembly_1.scafSeq.gapclosed|
-|[[0.10.13|SGA: Team 3 page]]| N/A | N/A | N/A | N/A |
-|[[team_4_page| ABySS: Team 4 page]]| 2,669 | 3,063 | 2,446,362,204|
-|[[team_5_page| Discovar de novo: Team 5 page]]| 10,427 | 12,549 | 2,395,797,282 | DiscovarDeNovo/KolossusAssembly/discovarDeNovoKolossusAssembly.fasta |

Banana Slug Genomics