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start [2015/06/01 23:22] jaredc |
start [2015/06/24 04:14] charles |
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* [[Spring 2015 syllabus]] The lecture schedule and registered note takers. | * [[Spring 2015 syllabus]] The lecture schedule and registered note takers. | ||
* [[Data overview]] Raw data and associated analysis. | * [[Data overview]] Raw data and associated analysis. | ||
- | * [[Teams]] Each team is attempting an assembly with a different program. | + | * [[Teams]] Each team is attempting an assembly with a different program. |
+ | * [[Summer 2015]] A page to organize summer work. | ||
* [[Style Guide|Complete guide for modifying the wiki]] | * [[Style Guide|Complete guide for modifying the wiki]] | ||
* [[computer_resources:campusrocks|Complete guide to campusRocks and SGE]] | * [[computer_resources:campusrocks|Complete guide to campusRocks and SGE]] | ||
* [[Budget]] | * [[Budget]] | ||
* [[Specific task]] | * [[Specific task]] | ||
- | * [[Banana slug genome browser]] A guide for accessing and setting up the banana slug hub. | + | * [[Banana slug genome browser]] A guide for accessing and setting up the banana slug hub. |
+ | * [[Backup directory]] Paths on Charles' hive account where assembly and raw data files are backed-up. | ||
===== Important pages of this wiki ===== | ===== Important pages of this wiki ===== | ||
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|[[0.10.13|SGA: Team 3 page]]| N/A | N/A | N/A | N/A | | |[[0.10.13|SGA: Team 3 page]]| N/A | N/A | N/A | N/A | | ||
|[[team_4_page| ABySS: Team 4 page]]| 2,669 | 3,063 | 2,446,362,204| | |[[team_4_page| ABySS: Team 4 page]]| 2,669 | 3,063 | 2,446,362,204| | ||
- | |[[team_5_page| Discovar de novo: Team 5 page]]| 9,513 | 10,634 | 2,245,788,654 | DiscovarDeNovo/firstFullRun/discovarDeNovoAssembly.fasta | | + | |[[team_5_page| Discovar de novo: Team 5 page]]| 10,427 | 12,549 | 2,395,797,282 | DiscovarDeNovo/KolossusAssembly/discovarDeNovoKolossusAssembly.fasta | |