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lecture_notes:06-03-2011 [2011/06/08 16:51] svohr created |
lecture_notes:06-03-2011 [2015/08/20 09:46] (current) 217.73.208.146 ↷ Links adapted because of a move operation |
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====== Paper Presentation ====== | ====== Paper Presentation ====== | ||
- | Sam Vohr presented the paper "Exact and complete short read alignment to microbial genomes using GPU programming"((http://bioinformatics.oxfordjournals.org/content/early/2011/03/30/bioinformatics.btr151.abstract)) which describes [[bioinformatic_tools:saruman|SARUMAN]] a tools for aligning short reads to a reference using Needlemap-Wunsch alignment implemented using CUDA. Details can be found on the [[bioinformatic_tools:saruman|SARUMAN]] page. | + | Sam Vohr presented the paper "Exact and complete short read alignment to microbial genomes using GPU programming"((http://bioinformatics.oxfordjournals.org/content/early/2011/03/30/bioinformatics.btr151.abstract)) which describes [[archive:bioinformatic_tools:saruman|SARUMAN]] a tools for aligning short reads to a reference using Needlemap-Wunsch alignment implemented using CUDA. Details can be found on the [[archive:bioinformatic_tools:saruman|SARUMAN]] page. |
It was decided that Wednesday June 8 at 12:00pm would be the deadline to get all updates into the wiki for grading. | It was decided that Wednesday June 8 at 12:00pm would be the deadline to get all updates into the wiki for grading. | ||