User Tools

Site Tools


This is an old revision of the document!

To Do

We went over some things that need updating in the wiki and plans for this weekend.

  • Document scripts added in bin folder.
  • Find out which lanes in 454 run 3 are banana slug runs.
    • Try mapping with Newbler or BWA.
    • BLAST/BLAT it.
  • SOAPdenovo assembly try 1:
    • Only on Illumina data
  • try 2:
    • Level 1: All Illumina data for contig building.
    • Level 2: 454 data for scaffolding.
You could leave a comment if you were logged in.
lecture_notes/05-27-2011.1306531564.txt.gz · Last modified: 2011/05/27 14:26 by eyliaw