User Tools

Site Tools



This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Last revision Both sides next revision
lecture_notes:05-03-2010 [2010/05/03 21:59]
lecture_notes:05-03-2010 [2010/05/04 07:26]
karplus fixed mistaken comment about flipping b->a->b'
Line 12: Line 12:
   - Biological tricks:   - Biological tricks:
     - c->​b->​a->​b'​->​d     - c->​b->​a->​b'​->​d
-    - an inversion of b->​a->​b'​ turns the scaffold into c->​b->​a'​->​b'​->​d...(I think this should be c->​b'​->​a'​->​b->​d)+    - an inversion of b->​a->​b'​ turns the scaffold into c->​b->​a'​->​b'​->​d... ​Note that flipping b->a->​b' ​reverses and complements the sequences, so that it becomes (b')->​a'​->​b' or b->a'​->​b'​.
 Burrows-Wheeler Transform (BWT) Burrows-Wheeler Transform (BWT)
lecture_notes/05-03-2010.txt ยท Last modified: 2010/05/08 18:11 by galt