lecture_notes:04-22-2011
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lecture_notes:04-22-2011 [2011/04/25 22:01] eyliaw created |
lecture_notes:04-22-2011 [2011/06/08 16:46] eyliaw [Burrows Wheeler Transform] |
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| ====== Burrows Wheeler Transform ====== | ====== Burrows Wheeler Transform ====== | ||
| + | The Burrows Wheeler Transform can be used to compress a suffix array, and is used in bioinformatic_tools:bwa. | ||
| ===== The prefix trie ====== | ===== The prefix trie ====== | ||
| The prefix trie is a tree built from possible prefixes, starting at the end of a branch and going backwards to the root. Each node is the range in the suffix array where the | The prefix trie is a tree built from possible prefixes, starting at the end of a branch and going backwards to the root. Each node is the range in the suffix array where the | ||
lecture_notes/04-22-2011.txt · Last modified: 2015/08/09 23:06 by 212.129.31.47
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