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lecture_notes:04-18-2011

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lecture_notes:04-18-2011 [2011/04/18 23:33]
eyliaw
lecture_notes:04-18-2011 [2011/04/18 23:33]
eyliaw
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-====== Game plan ====== +====== Game Plan ====== 
-Today, ​Kevin outlined the steps we should take to evaluate the data we have now.  We currently have 454 contigs built with [[bioinformatic_tools:​gs_de_novo_assembler|Newbler]] (but with a high error rate, so likely repeat regions were being joined). ​ The 454 data has poor coverage as well, but may work well as a starting point for [[bioinformatic_tools:​price|PRICE]],​ using Illumina data to extend them.+Kevin outlined the steps we should take to evaluate the data we have now.  We currently have 454 contigs built with [[bioinformatic_tools:​gs_de_novo_assembler|Newbler]] (but with a high error rate, so likely repeat regions were being joined). ​ The 454 data has poor coverage as well, but may work well as a starting point for [[bioinformatic_tools:​price|PRICE]],​ using Illumina data to extend them.
  
 So, our next steps are to: So, our next steps are to:
lecture_notes/04-18-2011.txt · Last modified: 2015/07/28 08:12 by 149.155.218.110