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lecture_notes:04-08-2011 [2011/04/11 18:04] svohr created |
lecture_notes:04-08-2011 [2015/07/28 15:12] (current) 149.155.218.110 ↷ Links adapted because of a move operation |
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====== More Jellyfish ====== | ====== More Jellyfish ====== | ||
- | This class we discussed the results from the [[bioinformatic_tools:jellyfish|Jellyfish]] run on //Pyrobaculum oguniense//. John St. John joined us and suggested some other tools to consider. | + | This class we discussed the results from the [[archive:bioinformatic_tools:jellyfish|Jellyfish]] run on //Pyrobaculum oguniense//. John St. John joined us and suggested some other tools to consider. |
- | * [[bioinformatic_tools:abyss|ABySS]] [(cite:abyss>http://www.bcgsc.ca/platform/bioinfo/software/abyss)] | + | * [[archive:bioinformatic_tools:abyss|ABySS]] [(cite:abyss>http://www.bcgsc.ca/platform/bioinfo/software/abyss)] |
* An assembler with modest memory requires. May be runnable on campusrocks. | * An assembler with modest memory requires. May be runnable on campusrocks. | ||
* Good support through active [[http://groups.google.com/group/abyss-users|user group]]. | * Good support through active [[http://groups.google.com/group/abyss-users|user group]]. |