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--- data_overview:2015:rna-seq [2015/07/16 18:50]
ceisenhart created
+++ data_overview:2015:rna-seq [2015/08/31 20:39]
ceisenhart
@@ Line 1: / Line 1: @@
 ====== Banana Slug RNA-Seq ======
+===== Sequencing data =====
+| Library | Run | Location | Notes |
+| - | - | http://genome-test.cse.ucsc.edu/~charles/BME235_backup/Data/2015/rnaSeq/ | |
+===== Files =====
+| File | Size | Reads|
+|BS-AL-SmartSeq_S9_L005_R1_001.fastq.gz | 7.4G | |
+|BS-AL-SmartSeq_S9_L005_R2_001.fastq.gz | 7.4G | |
+|BS-AL-Tn5Prime_S7_L005_R1_001.fastq.gz | 1.1G | |
+|BS-AL-Tn5Prime_S7_L005_R2_001.fastq.gz | 1.1G | |
+|BS-PA-SmartSeq_S10_L005_R1_001.fastq.gz | 7.8G | |
+|BS-PA-SmartSeq_S10_L005_R2_001.fastq.gz | 7.8G | |
+|BS-PA-Tn5Prime_S6_L005_R1_001.fastq.gz | 2.2G | |
+|BS-PA-Tn5Prime_S6_L005_R2_001.fastq.gz | 2.2G | |
+|BS-P-SmartSeq_S11_L005_R1_001.fastq.gz | 6.5G | |
+|BS-P-SmartSeq_S11_L005_R2_001.fastq.gz | 6.5G | |
+|BS-P-Tn5Prime_S8_L005_R1_001.fastq.gz | 3.0G | |
+|BS-P-Tn5Prime_S8_L005_R2_001.fastq.gz | 3.0G | |
+Total = 56G Raw unprocessed data
+===== FastQC =====
+The fastQC reports for the above files can be found online here [[http://hgwdev-ceisenhart.cse.ucsc.edu/~charles/BME235_backup/Data/2015/rnaSeq/fastQC/ | raw fastqc reports]].
+===== Processed data =====
+[[data_overview:2015:rna-seq:fastUniq | fastUniq ]]
+[[data_overview:2015:rna-seq:fastUniq | fastUniq + fastqQuality ]]
 Libraries are completed. Preliminary data is undergoing analysis.
 ===== RNA Extraction =====

Banana Slug Genomics