contributors:team_5_page
Differences
This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision Next revision | Previous revision Next revision Both sides next revision | ||
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contributors:team_5_page [2015/06/08 17:21] ceisenhart [Discovar de novo run logs] |
contributors:team_5_page [2015/07/18 20:30] ceisenhart ↷ Links adapted because of a move operation |
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| |50%run| 137 M | 137,695,736 | 273,653 | 1,006 | 19,658 | 1,489 | | 151,417 | | |50%run| 137 M | 137,695,736 | 273,653 | 1,006 | 19,658 | 1,489 | | 151,417 | | ||
| |UCSF50%run | 1.9 G | 1,839,371,352 | 1,126,557 | 1,632| 55,757 | 3,979 | 80,721 | 137,959,107 | | |UCSF50%run | 1.9 G | 1,839,371,352 | 1,126,557 | 1,632| 55,757 | 3,979 | 80,721 | 137,959,107 | | ||
| - | |firstFullRun | 2.2G | 2,245,788,654 | 1,450,447 | 1,548 | 153,999 | 10,634 | 118,545 | 972,798,485 | | + | |firstFullRun | 2.2G | 2,245,788,654 | 1,450,447 | 1,548 | 153,999 | 10,634 | 118,545 | 972,798,485 | |
| + | |Kolossus full run | 2.4G | 2,395,797,282 | 1,843,153 | 1299 | 129,831 | 12,549 | 113,978 | 1,106,140,476 | | ||
| The absolute path to our latest assembly in .fasta format is; | The absolute path to our latest assembly in .fasta format is; | ||
| - | /campusdata/BME235/S15_assemblies/DiscovarDeNovo/firstFullRun/discovarDeNovoAssembly.fasta | + | /campusdata/BME235/S15_assemblies/DiscovarDeNovo/KolossusAssembly/discovarDeNovoKolossusAssembly.fasta |
| Looking at the 10% run, the majority of scaffolds generated are quite short (<1kb). | Looking at the 10% run, the majority of scaffolds generated are quite short (<1kb). | ||
| Line 120: | Line 121: | ||
| See instructions for setting up the hub here, | See instructions for setting up the hub here, | ||
| - | [[banana_slug_genome_browser |Banana slug browser ]] | + | [[:banana_slug_genome_browser|Banana slug browser ]] |
contributors/team_5_page.txt · Last modified: 2015/09/04 14:56 by 157.55.39.159
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