contributors:team_5:fullrun1
Differences
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contributors:team_5:fullrun1 [2015/05/22 03:59] calef created |
contributors:team_5:fullrun1 [2015/09/02 16:21] (current) ceisenhart ↷ Page moved from team_5_page:fullrun1 to contributors:team_5:fullrun1 |
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| contig line N50: 9,513 | contig line N50: 9,513 | ||
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| scaffold line N50: 10,634 | scaffold line N50: 10,634 | ||
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| total bases in 1 kb+ scaffolds: 1,849,167,875 | total bases in 1 kb+ scaffolds: 1,849,167,875 | ||
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| total bases in 10 kb+ scaffolds: 972,798,485 | total bases in 10 kb+ scaffolds: 972,798,485 | ||
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| There are 340,451,678 reads of mean length 258.1 and mean base quality 31.5. | There are 340,451,678 reads of mean length 258.1 and mean base quality 31.5. | ||
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| MPL1 = mean length of first read in pair up to first error = 169 | MPL1 = mean length of first read in pair up to first error = 169 | ||
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| (normal range is 175-225 for 250 base reads) | (normal range is 175-225 for 250 base reads) | ||
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| Estimated chimera rate in read pairs (including mismapping) = 0.09%. | Estimated chimera rate in read pairs (including mismapping) = 0.09%. | ||
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| genomic read coverage, using 1 kb+ scaffolds for genome size estimate: 47.5 | genomic read coverage, using 1 kb+ scaffolds for genome size estimate: 47.5 | ||
contributors/team_5/fullrun1.1432267140.txt.gz · Last modified: 2015/05/22 03:59 by calef
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