contributors:team_5:50_ucsf_blast
Differences
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contributors:team_5:50_ucsf_blast [2015/05/18 05:07] gepoliano [Scafold length 30568] |
contributors:team_5:50_ucsf_blast [2015/05/18 05:15] gepoliano |
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| - | ======50% UCSF Libraries BLAST results, 1-15 top length scafolds====== | + | ======50% UCSF Libraries BLAST results, per scaffold length====== |
| + | =====Database: Nucleotide collection (nt)===== | ||
| + | =====Sequences producing significant alignments, using scafold as query===== | ||
| ====Scafold length 34857==== | ====Scafold length 34857==== | ||
| RID: NJSGMYXE01R | RID: NJSGMYXE01R | ||
| Line 44: | Line 47: | ||
| RID:NJWR2G3Z01R | RID:NJWR2G3Z01R | ||
| - | No significant similarity found. | + | ====Scafold length 29805==== |
| - | ======50% UCSF Libraries BLAST results, 15-30 top length scafolds====== | + | |
| - | =====Database: Nucleotide collection (nt)===== | + | |
| - | =====Sequences producing significant alignments, using scafold as query===== | + | |
| - | + | ||
| - | ====15th scafold, length 29805==== | + | |
| RID: NDAHDY9901R | RID: NDAHDY9901R | ||
| |**Description**|**Max score**|**Total score**|**Query cover**|**E-value**|**Indent**|**Accession**| | |**Description**|**Max score**|**Total score**|**Query cover**|**E-value**|**Indent**|**Accession**| | ||
| Line 57: | Line 55: | ||
| |Trichobilharzia regenti genome assembly T_regenti_v1_0_4, scaffold TRE_scaffold0004144|56.5|56.5|0%|0.027|100%|LL004144.1| | |Trichobilharzia regenti genome assembly T_regenti_v1_0_4, scaffold TRE_scaffold0004144|56.5|56.5|0%|0.027|100%|LL004144.1| | ||
| - | ====16th scafold, length 29232==== | + | ====Scafold length 29232==== |
| RID: NDDMNPMR015 | RID: NDDMNPMR015 | ||
| Line 69: | Line 67: | ||
| |Smeagol phillipensis voucher EED-Phy-878 28S ribosomal RNA gene, partial sequence|211|211|0%|5e-49|85%|FJ917229.1| | |Smeagol phillipensis voucher EED-Phy-878 28S ribosomal RNA gene, partial sequence|211|211|0%|5e-49|85%|FJ917229.1| | ||
| - | ====17th scafold, length 29174==== | + | ====Scafold length 29174==== |
| RID: NF02SUXK01R | RID: NF02SUXK01R | ||
| |**Description**|**Max score**|**Total score**|**Query cover**|**E-value**|**Indent**|**Accession**| | |**Description**|**Max score**|**Total score**|**Query cover**|**E-value**|**Indent**|**Accession**| | ||
| Line 75: | Line 73: | ||
| - | ====18th scafold, length 29126==== | + | ====Scafold length 29126==== |
| RID: NFBJG2PP01R | RID: NFBJG2PP01R | ||
| |**Description**|**Max score**|**Total score**|**Query cover**|**E-value**|**Indent**|**Accession**| | |**Description**|**Max score**|**Total score**|**Query cover**|**E-value**|**Indent**|**Accession**| | ||
| Line 81: | Line 79: | ||
| - | ====19th scafold, length 22322==== | + | ====Scafold length 22322==== |
| RID: NFBJG2PP01R | RID: NFBJG2PP01R | ||
| |**Description**|**Max score**|**Total score**|**Query cover**|**E-value**|**Indent**|**Accession**| | |**Description**|**Max score**|**Total score**|**Query cover**|**E-value**|**Indent**|**Accession**| | ||
| Line 89: | Line 87: | ||
| |Elaeophora elaphi genome assembly E_elaphi, scaffold EEL_scaffold0000026|52.8|52.8|0%|0.33|100%|LL710301.1| | |Elaeophora elaphi genome assembly E_elaphi, scaffold EEL_scaffold0000026|52.8|52.8|0%|0.33|100%|LL710301.1| | ||
| - | ====20th scafold, length 28130==== | + | ====Scafold length 28130==== |
| RID: NFP99B6K015 | RID: NFP99B6K015 | ||
| Line 95: | Line 93: | ||
| No significant similarity found. | No significant similarity found. | ||
| - | ====21th scafold, length 27845==== | + | ====Scafold length 27845==== |
| RID: NFUV0CRE014 | RID: NFUV0CRE014 | ||
| No significant similarity found. | No significant similarity found. | ||
contributors/team_5/50_ucsf_blast.txt · Last modified: 2015/09/02 16:22 by ceisenhart
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