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contributors:team_5:50_ucsf_blast

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contributors:team_5:50_ucsf_blast [2015/05/18 04:55]
gepoliano [Scafold length 31617]
contributors:team_5:50_ucsf_blast [2015/05/18 05:14]
gepoliano
Line 1: Line 1:
-======50% UCSF Libraries BLAST results, ​1-15 top length ​scafolds======+======50% UCSF Libraries BLAST results, ​per scaffold ​length====== 
 +=====Database:​ Nucleotide collection (nt)===== 
 +=====Sequences producing significant alignments, using scafold as query===== 
 ====Scafold length 34857==== ====Scafold length 34857====
 RID: NJSGMYXE01R ​ RID: NJSGMYXE01R ​
Line 33: Line 36:
 ====Scafold length 30696==== ====Scafold length 30696====
 RID: NJW1NJ9R014 ​ RID: NJW1NJ9R014 ​
-|**Description**|**Max score**|**Total score**|**Query cover**|**E-value**|**Indent**|**Accession**| +|**Description**|**Max score**|**Total score**|**Query cover**|**E-value**|**Indent**|**Accession**|**Notes**| 
-|Arion vulgaris clone ALU_06_4 microsatellite sequence |63.9 |63.9 |0% |2e-04 |87% |KP247478.1| +|Arion vulgaris clone ALU_06_4 microsatellite sequence |63.9 |63.9 |0% |2e-04 |87% |KP247478.1|Land slug, Spanish slug| 
-======50% UCSF Libraries BLAST results, 15-30 top length ​scafolds====== + 
-=====DatabaseNucleotide collection (nt)===== +====Scafold ​length ​30568==== 
-=====Sequences producing significant alignments, using scafold as query=====+RID:NJWJRVZD01R 
 + 
 +No significant similarity found. 
 + 
 +====Scafold length 30093==== 
 +RID:​NJWR2G3Z01R
  
 ====15th scafold, length 29805==== ====15th scafold, length 29805====
contributors/team_5/50_ucsf_blast.txt · Last modified: 2015/09/02 16:22 by ceisenhart