Banana Slug Genomics

This page is read only. You can view the source, but not change it. Ask your administrator if you think this is wrong.
BLASTN 2.2.31+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and


Webb Miller (2000), "A greedy algorithm for aligning DNA


sequences", J Comput Biol 2000; 7(1-2):203-14.








RID: MF5DRSCF014








Database: Nucleotide collection (nt)


           29,783,440 sequences; 92,776,249,918 total letters


Query= 195 381:325





Length=235








                                                                   Score     E


Sequences producing significant alignments:                       (Bits)  Value





gb|KM055065.1|  Notopygos caribea isolate PAN344 18S ribosomal...  75.0    5e-10


gb|KM055064.1|  Notopygos caribea isolate PAN343 18S ribosomal...  75.0    5e-10


gb|KM055063.1|  Notopygos sp. Vanuatu voucher UF:Annelida399 1...  75.0    5e-10


gb|KM055062.1|  Notopygos ornata voucher ECOSUR:OH-P0222 18S r...  75.0    5e-10


gb|KM055061.1|  Notopygos ornata voucher ECOSUR:OH-P0221 18S r...  75.0    5e-10


gb|KM055059.1|  Notopygos ornata voucher SIO:BIC:A5402 18S rib...  75.0    5e-10


gb|KM055058.1|  Notopygos ornata voucher SIO:BIC:A5401 18S rib...  75.0    5e-10


gb|KM055057.1|  Notopygos ornata voucher SIO:BIC:A5400 18S rib...  75.0    5e-10


gb|KM055056.1|  Notopygos ornata voucher SIO:BIC:A5399 18S rib...  75.0    5e-10


gb|KM055055.1|  Notopygos kekooa voucher SIO:BIC:A2274 18S rib...  75.0    5e-10


gb|KM055054.1|  Notopygos mitsukurii voucher SIO:BIC:A2463 18S...  75.0    5e-10


gb|KM055053.1|  Notopygos mitsukurii voucher SIO:BIC:A2462 18S...  75.0    5e-10


gb|KM055052.1|  Notopygos caribea isolate BEL111 18S ribosomal...  75.0    5e-10


gb|KM055051.1|  Archinome jasoni voucher SIO:BIC:A2315 18S rib...  75.0    5e-10


gb|KM055050.1|  Archinome jasoni voucher SIO:BIC:A2375 18S rib...  75.0    5e-10


gb|KM055049.1|  Archinome tethyana voucher SIO:BIC:A2874 18S r...  75.0    5e-10


gb|KM055048.1|  Archinome levinae voucher SIO:BIC:A1482 18S ri...  75.0    5e-10


gb|KP759769.1|  Babylonia spirata isolate KMCPGSZ04 18S riboso...  75.0    5e-10


dbj|AB914671.1|  Aiteng sp. YK-2014 gene for 18S rRNA, partial...  75.0    5e-10


gb|KJ855075.1|  Oxydromus humesi 18S ribosomal RNA gene, parti...  75.0    5e-10


gb|KP143043.1|  Uncultured eukaryote clone G1029.0064A64 18S r...  75.0    5e-10


gb|KP143042.1|  Uncultured eukaryote clone G1029.0022A22 18S r...  75.0    5e-10


gb|KP143014.1|  Uncultured eukaryote clone G1029.0058A58 18S r...  75.0    5e-10


gb|KP143013.1|  Uncultured eukaryote clone G1029.0042A42 18S r...  75.0    5e-10


gb|KP143012.1|  Uncultured eukaryote clone G1029.0011A11 18S r...  75.0    5e-10


gb|JF913969.2|  Syllis armillaris 18S ribosomal RNA gene, part...  75.0    5e-10


gb|JF903669.2|  Syllis punctulata 18S ribosomal RNA gene, part...  75.0    5e-10


gb|JF903668.2|  Syllis prolifera voucher MNCNM16.01/13286 clon...  75.0    5e-10


gb|JF903667.2|  Syllis prolifera voucher MNCNM16.01/13285 clon...  75.0    5e-10


gb|JF903664.2|  Syllis variegata voucher AMW.37720 18S ribosom...  75.0    5e-10


gb|JF903655.2|  Syllis cf. variegata MTA-2011 18S ribosomal RN...  75.0    5e-10


gb|JF903615.2|  Odontosyllis australiensis voucher AMW.37709 1...  75.0    5e-10


gb|JF903610.2|  Haplosyllis sp. 3 MTA-2011 voucher MNCNM16.01/...  75.0    5e-10


gb|KP335097.1|  Cernuella sp. ET3 18S ribosomal RNA gene, part...  75.0    5e-10


gb|KP335095.1|  Xeropicta derbentina isolate EV1 18S ribosomal...  75.0    5e-10


gb|KM460896.1|  Crassostrea virginica isolate Cv_A3 small subu...  75.0    5e-10


gb|KM460895.1|  Crassostrea virginica isolate Cv_A2 small subu...  75.0    5e-10


gb|KM460894.1|  Crassostrea virginica isolate Cv_A1 small subu...  75.0    5e-10


gb|KM460893.1|  Hyotissa hyotis isolate Hh_J3 small subunit ri...  75.0    5e-10


gb|KM460892.1|  Hyotissa hyotis isolate Hh_J2 small subunit ri...  75.0    5e-10


gb|KM460891.1|  Hyotissa hyotis isolate Hh_J1 small subunit ri...  75.0    5e-10


gb|KM460890.1|  Saccostrea kegaki isolate Sk_J3 small subunit ...  75.0    5e-10


gb|KM460889.1|  Saccostrea kegaki isolate Sk_J2 small subunit ...  75.0    5e-10


gb|KM460888.1|  Saccostrea kegaki isolate Sk_J1 small subunit ...  75.0    5e-10


gb|KM460887.1|  Ostrea circumpicta isolate Oc_J3 small subunit...  75.0    5e-10


gb|KM460886.1|  Ostrea circumpicta isolate Oc_J2 small subunit...  75.0    5e-10


gb|KM460885.1|  Ostrea circumpicta isolate Oc_J1 small subunit...  75.0    5e-10


gb|KM460884.1|  Ostrea denselamellosa isolate Od_S3 small subu...  75.0    5e-10


gb|KM460883.1|  Ostrea denselamellosa isolate Od_S2 small subu...  75.0    5e-10


gb|KM460882.1|  Ostrea denselamellosa isolate Od_S1 small subu...  75.0    5e-10


gb|KM460881.1|  Crassostrea nippona isolate Cn_E3 small subuni...  75.0    5e-10


gb|KM460880.1|  Crassostrea nippona isolate Cn_E2 small subuni...  75.0    5e-10


gb|KM460879.1|  Crassostrea nippona isolate Cn_E1 small subuni...  75.0    5e-10


gb|KM460878.1|  Crassostrea gigas isolate Cg_S3 small subunit ...  75.0    5e-10


gb|KM460877.1|  Crassostrea gigas isolate Cg_S2 small subunit ...  75.0    5e-10


gb|KM460876.1|  Crassostrea gigas isolate Cg_S1 small subunit ...  75.0    5e-10


gb|KM460875.1|  Crassostrea ariakensis isolate Ca_S3 small sub...  75.0    5e-10


gb|KM460874.1|  Crassostrea ariakensis isolate Ca_S2 small sub...  75.0    5e-10


gb|KM460873.1|  Crassostrea ariakensis isolate Ca_S1 small sub...  75.0    5e-10


gb|KM083602.1|  Hummondasys jamaicensis isolate MS21 18S ribos...  75.0    5e-10


dbj|AB967997.1|  Ochetostoma erythrogrammon gene for 18S ribos...  75.0    5e-10


dbj|AB967996.1|  Listriolobus sorbillans gene for 18S ribosoma...  75.0    5e-10


dbj|AB967995.1|  Listriolobus sorbillans gene for 18S ribosoma...  75.0    5e-10


dbj|AB967994.1|  Ikedosoma gogoshimense gene for 18S ribosomal...  75.0    5e-10


dbj|AB967993.1|  Ikedosoma gogoshimense gene for 18S ribosomal...  75.0    5e-10


dbj|AB967992.1|  Ikedosoma gogoshimense gene for 18S ribosomal...  75.0    5e-10


dbj|AB967991.1|  Ikedosoma gogoshimense gene for 18S ribosomal...  75.0    5e-10


dbj|AB967990.1|  Ikedosoma gogoshimense gene for 18S ribosomal...  75.0    5e-10


dbj|AB967989.1|  Ikedosoma gogoshimense gene for 18S ribosomal...  75.0    5e-10


dbj|AB967988.1|  Ikedosoma gogoshimense gene for 18S ribosomal...  75.0    5e-10


dbj|AB967987.1|  Ikedosoma elegans gene for 18S ribosomal RNA,...  75.0    5e-10


dbj|AB967986.1|  Ikedosoma elegans gene for 18S ribosomal RNA,...  75.0    5e-10


dbj|AB967985.1|  Ikedosoma elegans gene for 18S ribosomal RNA,...  75.0    5e-10


gb|KP702201.1|  Enchytraeus sp. Driefontein B 18S ribosomal RN...  75.0    5e-10


gb|KM875509.1|  Montenegrospeum bogici 18S ribosomal RNA gene,...  75.0    5e-10


gb|KP171533.1|  Physella acuta 18S ribosomal RNA gene, partial...  75.0    5e-10


gb|KM289064.1|  Urodasys spirostylis isolate 9i 18S ribosomal ...  75.0    5e-10


gb|KM289063.1|  Urodasys calicostylis isolate 186a 18S ribosom...  75.0    5e-10


gb|KM289062.1|  Urodasys calicostylis isolate 96a 18S ribosoma...  75.0    5e-10


gb|KM289061.1|  Urodasys calicostylis isolate 138a 18S ribosom...  75.0    5e-10


gb|KM289060.1|  Urodasys sp. 11i 18S ribosomal RNA gene, parti...  75.0    5e-10


gb|KM289059.1|  Urodasys nodostylis isolate BLZ1081 18S riboso...  75.0    5e-10


gb|KM289058.1|  Urodasys poculostylis isolate 137a 18S ribosom...  75.0    5e-10


gb|KM289057.1|  Urodasys poculostylis isolate 95a 18S ribosoma...  75.0    5e-10


gb|KM289056.1|  Urodasys poculostylis isolate 116a 18S ribosom...  75.0    5e-10


gb|KM289055.1|  Urodasys viviparus isolate 199c 18S ribosomal ...  75.0    5e-10


gb|KM289054.1|  Urodasys viviparus isolate 5h 18S ribosomal RN...  75.0    5e-10


gb|KM289051.1|  Urodasys viviparus isolate 190c 18S ribosomal ...  75.0    5e-10


gb|KM289050.1|  Urodasys viviparus isolate 64d 18S ribosomal R...  75.0    5e-10


gb|KM289049.1|  Urodasys viviparus isolate 43e 18S ribosomal R...  75.0    5e-10


gb|KM289044.1|  Urodasys viviparus isolate 1h 18S ribosomal RN...  75.0    5e-10


gb|KM289043.1|  Urodasys viviparus isolate 192c 18S ribosomal ...  75.0    5e-10


gb|KM289041.1|  Urodasys viviparus isolate 67e 18S ribosomal R...  75.0    5e-10


gb|KM289040.1|  Urodasys viviparus isolate 30e 18S ribosomal R...  75.0    5e-10


gb|KM289039.1|  Urodasys viviparus isolate 19c 18S ribosomal R...  75.0    5e-10


gb|KM289037.1|  Urodasys viviparus isolate 163c 18S ribosomal ...  75.0    5e-10


gb|KM289036.1|  Urodasys viviparus isolate 12c 18S ribosomal R...  75.0    5e-10


gb|KM289035.1|  Urodasys viviparus isolate 114c 18S ribosomal ...  75.0    5e-10


gb|KJ753898.1|  Inanidrilus leukodermatus isolate CE901 18S ri...  75.0    5e-10


gb|KJ753897.1|  Gianius aquaedulcis isolate CE654 18S ribosoma...  75.0    5e-10





ALIGNMENTS


>gb|KM055065.1| Notopygos caribea isolate PAN344 18S ribosomal RNA gene, partial 


sequence


Length=1726





 Score = 75.0 bits (40),  Expect = 5e-10


 Identities = 40/40 (100%), Gaps = 0/40 (0%)


 Strand=Plus/Minus





Query  1    TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAAtc  40


            ||||||||||||||||||||||||||||||||||||||||


Sbjct  356  TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATC  317








>gb|KM055064.1| Notopygos caribea isolate PAN343 18S ribosomal RNA gene, partial 


sequence


Length=1726





 Score = 75.0 bits (40),  Expect = 5e-10


 Identities = 40/40 (100%), Gaps = 0/40 (0%)


 Strand=Plus/Minus





Query  1    TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAAtc  40


            ||||||||||||||||||||||||||||||||||||||||


Sbjct  356  TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATC  317








>gb|KM055063.1| Notopygos sp. Vanuatu voucher UF:Annelida399 18S ribosomal RNA 


gene, partial sequence


Length=1726





 Score = 75.0 bits (40),  Expect = 5e-10


 Identities = 40/40 (100%), Gaps = 0/40 (0%)


 Strand=Plus/Minus





Query  1    TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAAtc  40


            ||||||||||||||||||||||||||||||||||||||||


Sbjct  356  TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATC  317








>gb|KM055062.1| Notopygos ornata voucher ECOSUR:OH-P0222 18S ribosomal RNA gene, 


partial sequence


Length=1726





 Score = 75.0 bits (40),  Expect = 5e-10


 Identities = 40/40 (100%), Gaps = 0/40 (0%)


 Strand=Plus/Minus





Query  1    TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAAtc  40


            ||||||||||||||||||||||||||||||||||||||||


Sbjct  356  TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATC  317








>gb|KM055061.1| Notopygos ornata voucher ECOSUR:OH-P0221 18S ribosomal RNA gene, 


partial sequence


Length=1726





 Score = 75.0 bits (40),  Expect = 5e-10


 Identities = 40/40 (100%), Gaps = 0/40 (0%)


 Strand=Plus/Minus





Query  1    TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAAtc  40


            ||||||||||||||||||||||||||||||||||||||||


Sbjct  356  TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATC  317








>gb|KM055059.1| Notopygos ornata voucher SIO:BIC:A5402 18S ribosomal RNA gene, 


partial sequence


Length=1717





 Score = 75.0 bits (40),  Expect = 5e-10


 Identities = 40/40 (100%), Gaps = 0/40 (0%)


 Strand=Plus/Minus





Query  1    TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAAtc  40


            ||||||||||||||||||||||||||||||||||||||||


Sbjct  356  TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATC  317








>gb|KM055058.1| Notopygos ornata voucher SIO:BIC:A5401 18S ribosomal RNA gene, 


partial sequence


Length=1700





 Score = 75.0 bits (40),  Expect = 5e-10


 Identities = 40/40 (100%), Gaps = 0/40 (0%)


 Strand=Plus/Minus





Query  1    TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAAtc  40


            ||||||||||||||||||||||||||||||||||||||||


Sbjct  356  TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATC  317








>gb|KM055057.1| Notopygos ornata voucher SIO:BIC:A5400 18S ribosomal RNA gene, 


partial sequence


Length=1726





 Score = 75.0 bits (40),  Expect = 5e-10


 Identities = 40/40 (100%), Gaps = 0/40 (0%)


 Strand=Plus/Minus





Query  1    TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAAtc  40


            ||||||||||||||||||||||||||||||||||||||||


Sbjct  356  TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATC  317








>gb|KM055056.1| Notopygos ornata voucher SIO:BIC:A5399 18S ribosomal RNA gene, 


partial sequence


Length=1696





 Score = 75.0 bits (40),  Expect = 5e-10


 Identities = 40/40 (100%), Gaps = 0/40 (0%)


 Strand=Plus/Minus





Query  1    TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAAtc  40


            ||||||||||||||||||||||||||||||||||||||||


Sbjct  356  TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATC  317








>gb|KM055055.1| Notopygos kekooa voucher SIO:BIC:A2274 18S ribosomal RNA gene, 


partial sequence


Length=1710





 Score = 75.0 bits (40),  Expect = 5e-10


 Identities = 40/40 (100%), Gaps = 0/40 (0%)


 Strand=Plus/Minus





Query  1    TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAAtc  40


            ||||||||||||||||||||||||||||||||||||||||


Sbjct  356  TGGATGTGGTAGCCGTTTCTCATGCTCCCTCTCCGGAATC  317
Banana Slug Genomics

User Tools

Site Tools

Page Tools
