contributors:team_2:runlog
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contributors:team_2:runlog [2015/05/04 19:28] charles created |
contributors:team_2:runlog [2015/09/02 16:19] (current) ceisenhart ↷ Page moved from soapdenovo2:runlog to contributors:team_2:runlog |
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| - | ==== Run 1 log file ==== | + | ==== Run 1 log ==== |
| # This file contains all the commands and explanations for the commands\\ | # This file contains all the commands and explanations for the commands\\ | ||
| Line 9: | Line 9: | ||
| # SW018_S1_L001, SW018_S1_L007, SW019_S2_L008 | # SW018_S1_L001, SW018_S1_L007, SW019_S2_L008 | ||
| - | SOAPdenovo2-63mer sparse_pregraph -s ../config_file\\ | + | SOAPdenovo2-63mer sparse_pregraph -s ../config_file -K 61 -g 15 -z 3000000000 -d 1 -e 1 -r 0 -p 20 -o soapdenovo2_sparseGraph |
| - | -K 61 -g 15 -z 3000000000\\ | + | |
| - | -d 1 -e 1 -r 0 -p 20 -o soapdenovo2_sparseGraph | + | |
| # -s is the configuration file\\ | # -s is the configuration file\\ | ||
contributors/team_2/runlog.1430767713.txt.gz · Last modified: 2015/05/04 19:28 by charles
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