contributors:team_1_page
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contributors:team_1_page [2015/05/03 23:18] jennie created |
contributors:team_1_page [2015/05/03 23:39] jennie [Programs used] |
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| =====Programs used===== | =====Programs used===== | ||
| - | The program, its location, and a brief explanation of what the program does | + | |
| + | ===GCC=== | ||
| + | GCC is a compiler for the GNU operating system (/campusdata/BME235/bin/gcc-4.9.2). Webpage: https://gcc.gnu.org/. | ||
| + | |||
| + | ===KmerGenie=== | ||
| + | KmerGenie estimates the best k-mer length for genome //de novo// assembly. Webpage: http://kmergenie.bx.psu.edu/. | ||
| + | |||
| + | ===Musket=== | ||
| + | Musket is a multistage k-mer spectrum based error corrector for Illumina short read data (/campusdata/BME235/bin/musket). Webpage: http://musket.sourceforge.net/. | ||
| ===Skewer=== | ===Skewer=== | ||
| Skewer is an adapter trimmer for Illumina paired-end sequences (/campusdata/BME235/S15_assemblies/SOAPdenovo2/adapterRemovalTask/skewer_run). Webpage: http://sourceforge.net/projects/skewer/. | Skewer is an adapter trimmer for Illumina paired-end sequences (/campusdata/BME235/S15_assemblies/SOAPdenovo2/adapterRemovalTask/skewer_run). Webpage: http://sourceforge.net/projects/skewer/. | ||
| - | |||
| - | ===GCC=== | ||
| - | GCC is a compiler for the GNU operating system (/campusdata/BME235/bin). Webpage: https://gcc.gnu.org/. | ||
contributors/team_1_page.txt · Last modified: 2015/07/18 20:29 by ceisenhart
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