assemblies:assemblies
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assemblies:assemblies [2015/07/18 21:21] 65.19.138.34 ↷ Links adapted because of a move operation |
assemblies:assemblies [2015/08/19 20:14] (current) chkcole |
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| |[[contributors:team_5_page| Discovar de novo: Team 5 page]]| 10,427 | 12,549 | 2,395,797,282 | http://genome-test.cse.ucsc.edu/~charles/BME235_backup/Assemblies/2015/DiscovarDeNovo/KolossusAssembly/discovarDeNovoKolossusAssembly.fasta | | |[[contributors:team_5_page| Discovar de novo: Team 5 page]]| 10,427 | 12,549 | 2,395,797,282 | http://genome-test.cse.ucsc.edu/~charles/BME235_backup/Assemblies/2015/DiscovarDeNovo/KolossusAssembly/discovarDeNovoKolossusAssembly.fasta | | ||
| ====Mitochondrion==== | ====Mitochondrion==== | ||
| - | [[natasha@dudek.org |Natasha Dudek]] (Discovar //de novo//) re-assembled the [[assemblies::2015::mitochondrion_assembly | mitochondrion]] in 2015 using data from the 2011 and 2010 class as well as new data. | + | [[natasha@dudek.org |Natasha Dudek]] (Discovar //de novo//) re-assembled the [[assemblies::2015::mitochondrion_assembly | mitochondrion]] in 2015. |
| | Contributing team | Contig N50 | Scaffold N50 | Total bases | Location | | | Contributing team | Contig N50 | Scaffold N50 | Total bases | Location | | ||
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| [[assemblies::2015::mitochondrion_assembly | The 2015 mitochondrion assembly page]] | [[assemblies::2015::mitochondrion_assembly | The 2015 mitochondrion assembly page]] | ||
| + | ====Repetitive Elements==== | ||
| + | | Contributing team | Contig N50 | Scaffold N50 | Total bases | Location | | ||
| + | |Charles Cole|29|29|19,510,691|campusrocks.ucsc.edu:/campusdata/BME235/S15_assemblies/RepArk/Banana_Slug_Repetitive_elements_without_UCSF/velvet_repeat_lib/contigs.fa| | ||
| + | [[assemblies::2015::repetitive_elements|2015 repetitive Elements page]] | ||
| =====2011===== | =====2011===== | ||
| ====Mitochondrion==== | ====Mitochondrion==== | ||
assemblies/assemblies.1437254497.txt.gz · Last modified: 2015/07/18 21:21 by 65.19.138.34
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