Differences

This shows you the differences between two versions of the page.

--- assemblies:assemblies [2015/07/16 18:54]
ceisenhart created
+++ assemblies:assemblies [2015/07/16 19:15]
ceisenhart
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 =====2015=====
+====Nuclear====
 | Contributing team | Contig N50 | Scaffold N50 | Total bases | Location |
 |[[::team_2_page|SOAP: Team 2 page]]| 8,033 | 11,000 | 2,293,889,058 | |
 |[[::team_4_page| ABySS: Team 4 page]]| 2,669 | 3,063 | 2,446,362,204|
 |[[::team_5_page| Discovar de novo: Team 5 page]]| 10,427 | 12,549 | 2,395,797,282 |  |
+====Mitochondrion====
+[[natasha@dudek.org |Natasha Dudek]] (Discovar //de novo//) re-assembled the [[assemblies::2015::mitochondrion_assembly | mitochondrion]] in 2015 using data from the 2011 and 2010 class as well as new data.
+| Contributing team | Contig N50 | Scaffold N50 | Total bases | Location |
+| Discovar //de novo// | 9,030 | 9,030 | 15,548 | |
+[[assemblies::2015::mitochondrion_assembly | The 2015 mitochondrion assembly page]]
 =====2011=====
+====Mitochondrion====
+[[https://users.soe.ucsc.edu/~karplus/| Kevin Karplus]] attempted a [[assemblies::2011::mitochondrion_assembly |mitochondrion assembly]] in 2012 using the data he had previously gathered.
+| Contributing team | Contig N50 | Scaffold N50 | Total bases | Location |
+| [[https://users.soe.ucsc.edu/~karplus/| Kevin Karplus]] |  |  |  | |
+[[assemblies::2011::mitochondrion_assembly | The 2012 mitochondrion assembly page ]]
 =====2010=====

Banana Slug Genomics