assemblies:2011:mitochondrion_assembly
Differences
This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision Next revision | Previous revision | ||
|
assemblies:2011:mitochondrion_assembly [2015/07/28 15:12] 149.155.218.110 ↷ Links adapted because of a move operation |
assemblies:2011:mitochondrion_assembly [2015/11/01 03:15] karplus [Reads] updated mitochondrion-draft2 link |
||
|---|---|---|---|
| Line 1: | Line 1: | ||
| ====== Mitochondrial sequence ====== | ====== Mitochondrial sequence ====== | ||
| - | The mitochondrion was re assembled in 2015, follow the new assembly here, [[assemblies::2015::mitochondrion_assembly | 2015 Mitochondrion assembly ]]. This page is for the 2012 mitochondrial assembly. | + | The mitochondrion was re assembled in 2015, follow the new assembly here, [[assemblies::2015::mitochondrion_assembly | 2015 Mitochondrion assembly ]]. This page is for the 2011 mitochondrial assembly. |
| The first draft sequence is available as {{{{:computer_resources:assemblies:mitochondrion-draft1.fasta.gz|draft1 gzipped fasta file}}. This corresponds to /campusdata/BME235/assemblies/slug/barcode-of-life/map-Illumina-raw-45/consensus-6 on campusrocks. It has 23,642 bases. | The first draft sequence is available as {{{{:computer_resources:assemblies:mitochondrion-draft1.fasta.gz|draft1 gzipped fasta file}}. This corresponds to /campusdata/BME235/assemblies/slug/barcode-of-life/map-Illumina-raw-45/consensus-6 on campusrocks. It has 23,642 bases. | ||
| Line 366: | Line 366: | ||
| - | The second draft sequence (with the short repeats expanded and the repeats ordered as best I can from the short-insert reads) is available as {{mitochondrion-draft2.fasta.gz|draft2 gzipped fasta file}}. This corresponds to /campusdata/BME235/assemblies/slug/barcode-of-life/map-Illumina-raw-47/draft on campusrocks. It has 36363 bases. | + | The second draft sequence (with the short repeats expanded and the repeats ordered as best I can from the short-insert reads) is available as {{computer_resources:assemblies:mitochondrion-draft2.fasta.gz|draft2 gzipped fasta file}}. This corresponds to /campusdata/BME235/assemblies/slug/barcode-of-life/map-Illumina-raw-47/draft on campusrocks. It has 36363 bases. |
assemblies/2011/mitochondrion_assembly.txt · Last modified: 2015/11/01 03:15 by karplus
Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Noncommercial-Share Alike 3.0 Unported
