Differences

This shows you the differences between two versions of the page.

--- archive:summer_2015 [2015/06/10 00:14]
jolespin
+++ archive:summer_2015 [2015/06/11 23:48]
calef [Volunteers]
@@ Line 14: / Line 14: @@
 |Christopher Kan|chkan@ucsc.edu|SGA|Pogson|Will finish SGA Assembly|
 | Nedda | nsaremi@ucsc.edu | SOAP | Green |
-| Josh | jolespin@ucsc.edu | SGA | Bernick |Once a good assembly is generated and we get a transcriptome, I can extract the exons, introns, and genes (5'UTR, CDS, 3'UTR).  I wrote some scripts that can do this and confirms with exon-junction motifs|
+| Josh | jolespin@ucsc.edu | SGA | Bernick |Once a good assembly is generated and we get a transcriptome, I can try and extract the exons, introns, and genes (5'UTR, CDS, 3'UTR).  I wrote some scripts that can do this and confirms with exon-junction motifs.  Can't meet weekly since I'll be in SD. |
+|Robert|calef@soe.ucsc.edu|Discovar|Green|Will start looking into running SOAP gap closer on the Kolossus Discovar assembly, as well as tools for scaffolding with RNA-seq data|
@@ Line 57: / Line 58: @@
 ====Finished Work====
-A list of work completed sense BME235 ended.
+A list of work completed since BME235 ended:
   * Disovar assembly with all shotgun data, accomplished on Kolussus
   * SOAPdenovo assembly with all shotgun data and gap closed, accomplished on edser2

Banana Slug Genomics