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archive:spring_2015_syllabus [2015/04/08 18:37] almussel |
archive:spring_2015_syllabus [2015/04/09 19:05] sihussai |
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| Number | Date | Topic | Lecturer | Lecture Notes | Note taker 1 | Note taker 2 | | | Number | Date | Topic | Lecturer | Lecture Notes | Note taker 1 | Note taker 2 | | ||
- | | 1 | 30 Mar | Course overview & introduction | Green/Karplus | [[lecture_notes:03-30-2015]] | Dudeck | | | + | | 1 | 30 Mar | Course overview & introduction | Green/Karplus | [[lecture_notes:03-30-2015]] | Dudeck | Eisenhart | |
| 2 | 1 Apr | The Biology of the Banana Slug | Leonard / Pearse | [[lecture_notes:04-01-2015]] | Matthew | Saremi | | | 2 | 1 Apr | The Biology of the Banana Slug | Leonard / Pearse | [[lecture_notes:04-01-2015]] | Matthew | Saremi | | ||
| 3 | 3 Apr | Disection and Sequencing Libraries | Weber / Green | [[lecture_notes:04-03-2015]] | Richardson | Hussain | | | 3 | 3 Apr | Disection and Sequencing Libraries | Weber / Green | [[lecture_notes:04-03-2015]] | Richardson | Hussain | | ||
| 4 | 6 Apr | De novo genome assembly I | Prost | | | | | | 4 | 6 Apr | De novo genome assembly I | Prost | | | | | ||
- | | 5 | 8 Apr | De novo genome assemlby II | Prost | | Hussain |jolespin | | + | | 5 | 8 Apr | De novo genome assemlby II | Prost | [[lecture_notes:04-08-2015]] | Hussain |jolespin | |
| 6 | 10 Apr | De novo genome assembly III | Prost | | Hussain |jolespin | | | 6 | 10 Apr | De novo genome assembly III | Prost | | Hussain |jolespin | | ||
- | | 7 | 13 Apr | Illumina sequencing technology | Green | | Musselman-Brown | | | + | | 7 | 13 Apr | Illumina sequencing technology | Green | | Musselman-Brown |Eisenhart | |
- | | 8 | 15 Apr | k-mer spectra analysis | Green | | Musselman-Brown | | | + | | 8 | 15 Apr | k-mer spectra analysis | Green | | Musselman-Brown | Cole| |
- | | 9 | 17 Apr | Genome assembly - theory and practice | Green | | Hussain | | | + | | 9 | 17 Apr | Genome assembly - theory and practice | Green | | Hussain |Cole | |
| 10 | 20 Apr | Team 1 Report | Team 1 | | | | | | 10 | 20 Apr | Team 1 Report | Team 1 | | | | | ||
| 11 | 22 Apr | Team 2 Report | Team 2 | | | | | | 11 | 22 Apr | Team 2 Report | Team 2 | | | | | ||
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| 13 | 27 Apr | Team 4 Report | Team 4 | | | | | | 13 | 27 Apr | Team 4 Report | Team 4 | | | | | ||
| 14 | 29 Apr | Team 5 Report | Team 5 | | | | | | 14 | 29 Apr | Team 5 Report | Team 5 | | | | | ||
- | | 15 | 1 May | Strategy Session | Green | | | | | + | | 15 | 1 May | Strategy Session | Green | | Richardson | | |
- | | 16 | 4 May | Population Genetics / PSMC | Green | | Musselman-Brown | | | + | | 16 | 4 May | Population Genetics / PSMC | Green | | Musselman-Brown | Cole | |
- | | 17 | 6 May | RNAseq | Green/? | | Musselman-Brown | | | + | | 17 | 6 May | RNAseq | Green/? | | Musselman-Brown | Richardson | |
| 18 | 8 May | Team 1 Report | Team 1 | | | | | | 18 | 8 May | Team 1 Report | Team 1 | | | | | ||
| 19 | 11 May | Team 2 Report | Team 2 | | | | | | 19 | 11 May | Team 2 Report | Team 2 | | | | |