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archive:specific_task [2015/05/27 16:56] jennie |
archive:specific_task [2015/05/27 19:20] jennie |
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|Task| Assignee | Status | Notes| | |Task| Assignee | Status | Notes| | ||
- | |Assemble repeat genome with RepArk|Team 1|In progress|Charles has started a run| | + | |Assemble repeat genome with RepArk|Team 1|In progress|Charles has started a test run using the original Hiseq and Miseq reads| |
- | |Run gap closer on SOAP denovo assembly| | | Use SOAP denovo's external gap closer. Chose a reasonable name for new assembly. | | + | |Run GapCloser on SOAP denovo assembly|Charles|In progress| Use SOAP denovo's external gap closer. Chose a reasonable name for new assembly. | |
|Find virus contigs and use PRICE to expand to full viruses | Cole,jolespin | | jolespin virus assembly progress can be accessed at [[jolespin_virus]]| | |Find virus contigs and use PRICE to expand to full viruses | Cole,jolespin | | jolespin virus assembly progress can be accessed at [[jolespin_virus]]| | ||
| Mate-pair adapter and linker removal| | | | | | Mate-pair adapter and linker removal| | | | |