archive:specific_task
Differences
This shows you the differences between two versions of the page.
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archive:specific_task [2015/05/26 17:03] jdhouser |
archive:specific_task [2015/05/27 01:11] jennie |
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| | End trim SeqPrepped data | Hussain | | | | | End trim SeqPrepped data | Hussain | | | | ||
| | Error correct SeqPrepped data | McGovern | waiting on previous step | | | | Error correct SeqPrepped data | McGovern | waiting on previous step | | | ||
| + | | Error Correction new data| McGovern (Musket) | In progress | | | ||
| + | | Install bowtie | Chaves | In progress |/campusdata/gchaves/Bowtie/bowtie2-2.2.5 (Not yet running successfully)| | ||
| | UCSC Genome browser hub | Eisenhart | Complete | https://banana-slug.soe.ucsc.edu/banana_slug_genome_browser | | | UCSC Genome browser hub | Eisenhart | Complete | https://banana-slug.soe.ucsc.edu/banana_slug_genome_browser | | ||
| | Plot contig size histogram for current assembly (SOAPdenovo2 results) | Markello | Complete | | | | Plot contig size histogram for current assembly (SOAPdenovo2 results) | Markello | Complete | | | ||
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| | Find cost of creating a tagmentase library| Dudek | | ~$50 | | | Find cost of creating a tagmentase library| Dudek | | ~$50 | | ||
| | Merge/trim new data (SeqPrep) | Hussain | Completed | See wiki page for each data set for details | | | Merge/trim new data (SeqPrep) | Hussain | Completed | See wiki page for each data set for details | | ||
| - | | Analyze new data (preqc) | Richardson | In progress | {{:ucsf_new_lib_preqc_report.pdf|}}| | + | | Analyze new data (preqc) | Richardson | Completed | See wiki page for each data set for details | |
| - | | Error Correction new data| McGovern (Musket) & Richardson (BLESS/racer) | In progress | These programs have not yet been run succesfully... | | + | |
| - | | Install bowtie | Chaves | In progress |/campusdata/gchaves/Bowtie/bowtie2-2.2.5 (Not yet running successfully)| | + | |
| | Preqc on new mate pair SW041 SW042| Saremi | Completed | | | | Preqc on new mate pair SW041 SW042| Saremi | Completed | | | ||
| | Update the wiki to include mate pair meta data | Eisenhart | completed | | | Update the wiki to include mate pair meta data | Eisenhart | completed | | ||
archive/specific_task.txt · Last modified: 2015/08/04 03:32 by 68.180.228.52
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