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archive:specific_task [2015/05/18 07:01] charles |
archive:specific_task [2015/05/18 17:36] sihussai |
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| Plot contig size vs total genome size for assemblies | unassigned | | | | | Plot contig size vs total genome size for assemblies | unassigned | | | | ||
| Ask UCSF about the discrepancy in the numbers of reads | unassigned | | I don't see any discrepancy in the number of reads, perhaps this can be removed? | | | Ask UCSF about the discrepancy in the numbers of reads | unassigned | | I don't see any discrepancy in the number of reads, perhaps this can be removed? | | ||
- | | Analyze SeqPrep results | | | | | + | | Fastqc/kmergenie on SeqPrepped data | unassigned | waiting on previous steps | | |
+ | | End trim SeqPrepped data | Hussain | | | | ||
+ | | Error correct SeqPrepped data | McGovern | waiting on previous step | | | ||
| UCSC Genome browser hub | Eisenhart | Complete | https://banana-slug.soe.ucsc.edu/banana_slug_genome_browser | | | UCSC Genome browser hub | Eisenhart | Complete | https://banana-slug.soe.ucsc.edu/banana_slug_genome_browser | | ||
| Plot contig size histogram for current assembly (SOAPdenovo2 results) | Markello | Complete | | | | Plot contig size histogram for current assembly (SOAPdenovo2 results) | Markello | Complete | | |