archive:specific_task
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archive:specific_task [2015/05/15 22:14] charles |
archive:specific_task [2015/05/16 02:17] ceisenhart |
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| |Task| Assignee | Status | Notes| | |Task| Assignee | Status | Notes| | ||
| + | | Find genes in the mitochondrial genome | unassigned | | The genome is on the browser, find it here https://banana-slug.soe.ucsc.edu/banana_slug_genome_browser | | ||
| | Plot contig size vs total genome size for assemblies | | | | | | Plot contig size vs total genome size for assemblies | | | | | ||
| | Ask UCSF about the discrepancy in the numbers of reads | | | I don't see any discrepancy in the number of reads, perhaps this can be removed? | | | Ask UCSF about the discrepancy in the numbers of reads | | | I don't see any discrepancy in the number of reads, perhaps this can be removed? | | ||
| | Analyze SeqPrep results | | | | | | Analyze SeqPrep results | | | | | ||
| - | | UCSC Genome browser hub | Eisenhart | Complete | Discovar De novo and SOAP have data up, very early phase, make a custom hub with this link, http://hgwdev-ceisenhart.cse.ucsc.edu/~ceisenhart/hubs/bananaSlug/hub.txt | | + | | UCSC Genome browser hub | Eisenhart | Complete | https://banana-slug.soe.ucsc.edu/banana_slug_genome_browser | |
| | Plot contig size histogram for current assembly (SOAPdenovo2 results) | Markello | Complete | | | | Plot contig size histogram for current assembly (SOAPdenovo2 results) | Markello | Complete | | | ||
| | Plot scaffold size histogram for current assembly (SOAPdenovo2 results) | Markello | Complete | | | | Plot scaffold size histogram for current assembly (SOAPdenovo2 results) | Markello | Complete | | | ||
archive/specific_task.txt ยท Last modified: 2015/08/04 03:32 by 68.180.228.52
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