Banana Slug Genomics

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====== sff_extract ====== [[http://bioinf.comav.upv.es/sff_extract/index.html|sff_extract]] is a utility from the [[http://www.comav.upv.es/|Center for the Conservation and Breeding of the Agrodiverdity]] at the Polythechnical University of Valencia. 454 produces data in a binary sff format. Most assemblers (other than newbler) don't read sff directly. Instead they require fasta and fasta.qual data. This software produces both of these as well as a xml file containing clipping information. It can be fed with multiple sff files and produce a single fasta file.