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archive:computer_resources:campusrocks [2015/04/18 20:35] charles [Sungrid Job scheduler] |
archive:computer_resources:campusrocks [2015/04/18 20:38] charles [Sungrid Job scheduler] |
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#$ -q [Name of specific server queue]\\ | #$ -q [Name of specific server queue]\\ | ||
Used to specify which set of servers you would like the sungrid scheduler to schedule/run your jobs in. Names on campus rocks include 'all.q' and 'small.q' | Used to specify which set of servers you would like the sungrid scheduler to schedule/run your jobs in. Names on campus rocks include 'all.q' and 'small.q' | ||
+ | |||
+ | Example qsub commands: | ||
+ | * qsub -N skewer_adapter_removal -cwd -V -pe mpi 20 -l mem_free=50g /campusdata/BME235/S15_assemblies/SOAPdenovo2/adapterRemovalTask/skewer_run/run_skewer_adapter_removal.sh | ||