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--- archive:computer_resources:campusrocks [2010/04/16 05:29]
galt
+++ archive:computer_resources:campusrocks [2010/04/19 19:53]
jstjohn
@@ Line 34: / Line 34: @@
   * 3.4TB available
   * OS: GNU/Linux 2.6.18-128.1.14.el5xen
+===== Setting Environmental Variables =====
+If you would like to add our classes bin directory (or any other directory for that matter) then add this to your .profile:
+  PATH=/campusdata/BME235/bin:$PATH
+  export PATH
+To use the gcc-4.5 family of compilers stored in our bin directory then you can specify the LD_LIBRARY_PATH environmental variable:
+  LD_LIBRARY_PATH=/campusdata/BME235/lib:/campusdata/BME235/lib64:$LD_LIBRARY_PATH
+  export LD_LIBRARY_PATH
+To make your default folder creation settings group readable and writable then add this line to your .profile:
+  umask 007
 ===== Sungrid Job scheduler =====
@@ Line 51: / Line 68: @@
 [[http://web.njit.edu/topics/HPC/basement/sge/SGE.html|SunGrid Quick Start]]
+Useful submit-script settings for SGE:
+#$ -N some_name_here\\
+Apparently, you must have a single word after -N\\
+This gives a nicer name to your script when you run qstat.\\
+#$ -V\\
+Your jobs use **your** environment variables.

Banana Slug Genomics