archive:computer_resources:assemblies
Differences
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archive:computer_resources:assemblies [2011/06/03 21:43] eyliaw [slug/] |
archive:computer_resources:assemblies [2011/06/03 22:12] eyliaw [slug/] |
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| * Statistics for each kmer size assembly (using illumina and 454 data, using both for contig and scaffolding): | * Statistics for each kmer size assembly (using illumina and 454 data, using both for contig and scaffolding): | ||
| * k31: | * k31: | ||
| - | * 1298372 scaffolds from 4814226 contigs sum up 632702276bp, with average length 487, 0 gaps filled | + | * 1,298,372 scaffolds from 4,814,226 contigs sum up 632,702,276bp, with average length 487, 0 gaps filled |
| - | * 3611844 scaffolds&singleton sum up 1133413022bp, with average length 313 | + | * 3,611,844 scaffolds&singleton sum up 1,133,413,022bp, with average length 313 |
| - | * the longest is 10340bp,scaffold N50 is 442 bp, scaffold N90 is 148 bp | + | * the longest is 10,340bp,scaffold N50 is 442 bp, scaffold N90 is 148 bp |
| * k47: | * k47: | ||
| - | * 871819 scaffolds from 5306463 contigs sum up 530762874bp, with average length 608, 0 gaps filled | + | * 871,819 scaffolds from 5,306,463 contigs sum up 530,762,874bp, with average length 608, 0 gaps filled |
| - | * 4203195 scaffolds&singleton sum up 1296678043bp, with average length 308 | + | * 4,203,195 scaffolds&singleton sum up 1,296,678,043bp, with average length 308 |
| - | * the longest is 14750bp,scaffold N50 is 458 bp, scaffold N90 is 140 bp | + | * the longest is 14,750bp,scaffold N50 is 458 bp, scaffold N90 is 140 bp |
| * k63: | * k63: | ||
| - | * 270887 scaffolds from 4022505 contigs sum up 139720415bp, with average length 515, 0 gaps filled | + | * 270,887 scaffolds from 4,022,505 contigs sum up 139,720,415bp, with average length 515, 0 gaps filled |
| - | * 3710532 scaffolds&singleton sum up 690332560bp, with average length 186 | + | * 3,710,532 scaffolds&singleton sum up 690,332,560bp, with average length 186 |
| - | * the longest is 14897bp,scaffold N50 is 232 bp, scaffold N90 is 112 bp | + | * the longest is 14,897bp,scaffold N50 is 232 bp, scaffold N90 is 112 bp |
archive/computer_resources/assemblies.txt · Last modified: 2015/09/02 16:53 by 92.247.181.31
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