archive:computer_resources:assemblies
Differences
This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision | Next revision Both sides next revision | ||
|
archive:computer_resources:assemblies [2011/06/02 19:27] eyliaw [slug/] |
archive:computer_resources:assemblies [2011/06/02 19:27] eyliaw [slug/] |
||
|---|---|---|---|
| Line 120: | Line 120: | ||
| * Runs with k27, 31, 47, and 63 so far. 47 was the best overall. 63 got the longest contig (~14.9kb). | * Runs with k27, 31, 47, and 63 so far. 47 was the best overall. 63 got the longest contig (~14.9kb). | ||
| * Run parameters: | * Run parameters: | ||
| - | * pregraph: | + | - pregraph: |
| * lowest count size of 2 (-d 2) | * lowest count size of 2 (-d 2) | ||
| - | * contig: | + | - contig: |
| * solve tiny repeats on (-R) | * solve tiny repeats on (-R) | ||
| - | * map: | + | - map: |
| * all default | * all default | ||
| - | * scaff: | + | - scaff: |
| * intra-scaffold gap closure on (-F) | * intra-scaffold gap closure on (-F) | ||
archive/computer_resources/assemblies.txt · Last modified: 2015/09/02 16:53 by 92.247.181.31
Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Noncommercial-Share Alike 3.0 Unported
