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archive:bioinformatic_tools:seqprep [2011/05/12 06:08] eyliaw [Output] |
archive:bioinformatic_tools:seqprep [2015/07/28 06:26] (current) ceisenhart ↷ Page moved from bioinformatic_tools:seqprep to archive:bioinformatic_tools:seqprep |
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* -2 specifies the second trimmed and non-merged output read file name | * -2 specifies the second trimmed and non-merged output read file name | ||
* -s specifies the merged file name (if no merging is desired then do not supply this argument) | * -s specifies the merged file name (if no merging is desired then do not supply this argument) | ||
- | * -m will merge reads that overlap together and export them to the file following the option. There are additional options for adjusting merging parameters. | ||
* -E specifies a human readable merged output file showing alignments which will look like this: | * -E specifies a human readable merged output file showing alignments which will look like this: | ||
<code> | <code> |