Banana Slug Genomics

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==== Installation ====

 * attempted to run pre-compiled binaries, but they expect non existent shared libraries in /usr/lib.

Running make gives the following error:
g_band.c:44: error: static declaration of 'g' follows non-static declaration
inc/extvab.h:20: error: previous declaration of 'g' was here
g_band.c:44: error: static declaration of 'h' follows non-static declaration
inc/extvab.h:20: error: previous declaration of 'h' was here
make: *** [g_band.o] Error 1


Googling this problem reveals that one way to fix this problem is take the static definition off of g_band.c:44. 
http://www.mail-archive.com/debian-med-commit@lists.alioth.debian.org/msg00746.html


   cp g_band.c g_band_orig.c

Changed line 44 to now read:
   //static int g, h, m;                           /* g = G, h = H, m = g+h */
   int g, h;                               /* g = G, h = H, m = g+h */
   static int m;

Now build finishes fine other than the following warning:
   make: warning:  Clock skew detected.  Your build may be incomplete.

For installation I made the directory
  /campusdata/BME235/bin/euler 
and symlinked the executables and scripts into that directory.

to execute program or scripts one option is to do one of the following.

  - add /campusdata/BME235/bin/euler to your path

Banana Slug Genomics

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