archive:bioinformatic_tools:bwa
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archive:bioinformatic_tools:bwa [2011/05/20 18:03] svohr |
archive:bioinformatic_tools:bwa [2011/05/20 18:48] svohr [After SeqPrep] |
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| {{:bioinformatic_tools:run2_seqprep_template_size_histogram.png|}} | {{:bioinformatic_tools:run2_seqprep_template_size_histogram.png|}} | ||
| - | Here is the same plot with the 454 length distribution for comparison. | + | These histograms show the mapped lengths for the paired-end templates and the lengths of merged reads from SeqPrep along with the 454 read length distribution for comparison. In each of these, we can see the distinct range for the SeqPrep merged reads and the split between merged and unmerged pairs. Lengths less than 90 are probably incorrect. The higher frequency of these in run 1 can be explained its higher coverage. |
| - | {{:bioinformatic_tools:run2_seqprep_template_size_histogram_with_454_length2.png|}} | + | {{:bioinformatic_tools:run1_seqprep_histogram.png|}} |
| + | {{:bioinformatic_tools:run2_bc07_seqprep_histogram.png|}} | ||
| + | {{:bioinformatic_tools:run2_bc08_seqprep_histogram.png|}} | ||
archive/bioinformatic_tools/bwa.txt · Last modified: 2015/09/04 09:06 by 68.180.228.52
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