Banana Slug Genomics

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===== ARACHNE =====
====High Level Overview====
Arachne was the first program developed by the Broad institute to assemble "long reads from sanger-method sequencing"[(cite:broad>http://www.broadinstitute.org/science/programs/genome-biology/computational-rd/computational-research-and-development)]. They have a more current program named [[bioinformatic_tools:allpaths|AllPaths]] that they claim is better suited to shorter sequence reads (100+ bp)[(cite:broad)]. Arachne may be download from [[ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/|here]], and there is a [[http://www.broadinstitute.org/crd/wiki/index.php/Arachne_Main_Page|documentation wiki]] set up for it as well.


Arachne also requires GCC-4.3+. 

===== References =====
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~~REFNOTES cite~~

Banana Slug Genomics

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